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Databases and resource catalogs

The platform offers a one-stop search for samples, omics, and research resources,
supporting public and controlled access policies as well as online analysis.
Langtaosha Preprint Server

Langtaosha Preprint Server(A preprint platform for life sciences)

A life sciences preprint platform powered by blockchain and AI technology, allowing researchers to rapidly share their work before formal journal publication.
Preprint Free to post Open access
2025/11/21 567

552
CryoSeek

CryoSeek(A cryo-EM structure database for unknown biomolecules)

A cryo‑EM data platform that accelerates the discovery and analysis of unknown biological macromolecules directly from natural samples.
Cryo‑EM Molecular discovery Structural biology
2025/11/21 671

665
scQTLbase

scQTLbase(A single-cell eQTL database)

A one‑stop portal for human single‑cell eQTLs, integrating diverse datasets with search, UMAP and genome‑browser visualization, and GWAS colocalization to advance discovery of disease susceptibility genes.
Single‑cell eQTL Gene regulation GWAS colocalization
2023/09/15 1022

889
sc-xQTLatlas

sc-xQTLatlas(A single-cell xQTL database for immune cells)

A single-cell genotype-molecular phenotype association resource platform at cell resolution, focusing on immune cells, helps discover key genes involved in genetic regulation and disease.
Single‑cell xQTL Immune cells Genetic regulation
2025/09/01 778

690
immune-3′aQTL 

immune-3′aQTL (A 3'aQTL database for immune cells)

This immune-3′aQTL a database provides 3' untranslated region (3'UTR) alternative polyadenylation (APA) quantitative trait loci (3'aQTLs) across in 18 human immune baseline cell types and 8 stimulation conditions.
3'aQTL Alternative polyadenylation Immune cells 3'UTR
2023/12/15 656

381
ipaQTL-atlas

ipaQTL-atlas(An intronic polyadenylation QTL database)

The ipaQTL-atlas is a database for intronic polyadenylation based on 15,170 RNA-seq samples across 49 human Genotype-Tissue Expression (GTEx) project (version 8) tissues from 838 individuals.
Intronic APA Genetic regulation GWAS colocalization
2022/08/18 735

425
3′aQTL-atlas

3′aQTL-atlas(A 3′aQTL database across human normal tissues)

The 3′aQTL-atlas is a comprehensive list of 3′aQTLs, containing approximately 1.49 million SNPs associated with the APA of target genes, based on 15,201 RNA-seq samples across 49 human normal tissues isolated from 838 individuals.
3′aQTL Alternative polyadenylation GWAS colocalization
2021/08/13 585

435
eRNA-QTL atlas

eRNA-QTL atlas(An enhancer RNA QTL database)

The eRNA-QTL atlas is a better indicator of enhancer activity termed enhancer RNAs (eRNAs), broadly transcribed bidirectional or unidirectional non-coding RNAs (ncRNAs) across numerous cell types and tissues.
Enhancer RNA Enhancer activity Transcriptional regulation
2025/02/14 686

452
rareAPA

rareAPA(A rare alternative polyadenylation variant database)

The rareAPA is a comprehensive database exploring rare APA events (APA outliers/ aOutliers) and the functional rare variants (RVs) leading to aOutliers.
Rare APA Rare variants APA regulation
2025/02/16 762

541
eRNA_IDO

eRNA_IDO(An eRNA identification and annotation platform)

eRNA-IDO is an integrative platform for identification, interactome discovery, and functional annotation of enhancer RNAs (eRNAs).which comprises two modules: eRNA-ID and eRNA-Anno.
eRNA identification Functional annotation Interactome network
2024/08/23 684

468

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